List of software published and maintaned by (IB)²:
- DynaMine: Prediction backbone dynamics from protein sequence.
- Sephiroth: unsupervised method for disulfide connectivity prediction.
- PhyloCys: unsupervised method for disulfide connectivity prediction using phylogenetic trees.
- Deogen: machine learning based variant-effect predictor that exploits the multi-level contextualization of the variant and the protein on which it occurs to annotate SNVs and INDELs.
- Xhresmoi: machine learning method for the prediction of cysteine bonds oxidation states.
- Noumenon: unbiased dataset for the validation of contact prediction methods.
- Deogen on Docker: Deogen pipeline is now available also as Docker container!